BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033D10LP1|AL429739
(866 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig869 1701 0.0
3x_Contig1624 151 2e-36
3x_Contig1503 151 2e-36
3x_Contig1722 149 9e-36
3x_Contig1263 147 3e-35
>3x_Contig869
Length = 2873
Score = 1701 bits (856), Expect = 0.0
Identities = 862/866 (99%)
Strand = Plus / Minus
Query: 1 gatctccagattacaaattgctttgtgttttcaaattacagtctggcgccttaaaccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1936 gatctccagattacaaattgctttgtgttttcaaattacagtctggcgccttaaaccaac 1877
Query: 61 ttggctaccgagaggaagcttgcgtgtggagcgatttcccagtcaactcggtgtgccgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1876 ttggctaccgagaggaagcttgcgtgtggagcgatttcccagtcaactcggtgtgccgtg 1817
Query: 121 ggtaccccgcgtaaatwagcccatagaccctgtttagacttatttacctatttgcattaa 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1816 ggtaccccgcgtaaataagcccatagaccctgtttagacttatttacctatttgcattaa 1757
Query: 181 tgatagatgatacaagatactgtgagatatggattcatcacatactgaaggttttgaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1756 tgatagatgatacaagatactgtgagatatggattcatcacatactgaaggttttgaatt 1697
Query: 241 ggtatcacgtgatttggatgtccagaatcaccaatgaggaaaaggaatattatgcaactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1696 ggtatcacgtgatttggatgtccagaatcaccaatgaggaaaaggaatattatgcaactc 1637
Query: 301 cgtataaaggtttcaaagctttcccgggttccaagacaaggcatcgtgtttatctagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1636 cgtataaaggtttcaaagctttcccgggttccaagacaaggcatcgtgtttatctagaag 1577
Query: 361 tagtgaagtcagagtactagtttgacagatggatctactgcttaattagacaaatgaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1576 tagtgaagtcagagtactagtttgacagatggatctactgcttaattagacaaatgaaac 1517
Query: 421 tagcggggctaggaaattttattccgaacaaggacagtwactggtccacagaaattctgt 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1516 tagcggggctaggaaattttattccgaacaaggacagtaactggtccacagaaattctgt 1457
Query: 481 ccggaatgggttaaacgaacatcatatagttcggaagatttttttaccactgcagtattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1456 ccggaatgggttaaacgaacatcatatagttcggaagatttttttaccactgcagtattt 1397
Query: 541 gaactattaacaaaatatggagagaagctatcagtcaaatcaaggaagatatggtttcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1396 gaactattaacaaaatatggagagaagctatcagtcaaatcaaggaagatatggtttcat 1337
Query: 601 cagatccacggatattatggaaagaaggggactaawatgtaccgcaattcctttgataga 660
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1336 cagatccacggatattatggaaagaaggggactaaaatgtaccgcaattcctttgataga 1277
Query: 661 tagagatatcgtgagactgatctaatattggattgtctagaacaaatgatagtagaaact 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1276 aagagatatcgtgagactgatctaatattggattgtctagaacaaatgatagtagaaact 1217
Query: 721 taagccacggtatcttatatactaagaaatgaactggatcattacgggcatgtaaatata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1216 taagccacggtatcttatatactaagaaatgaactggatcattacgggcatgtaaatata 1157
Query: 781 ccgacagcactgagagtagtcctcgtgatatgcattttaacacctagtcctacagcaaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1156 ccgacagcactgagagtagtcctcgtgatatgcattttaacacctagtcctacagcaaac 1097
Query: 841 tgacgcttccatgcaatctcggttgt 866
||||||||||||||||||||||||||
Sbjct: 1096 tgacgcttccatgcaatctcggttgt 1071
>3x_Contig1624
Length = 12551
Score = 151 bits (76), Expect = 2e-36
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 1 gatctccagattacaaattgctttgtgttttcaaattacagtctggcgccttaaaccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6019 gatctccagattacaaattgctttgtgttttcaaattacagtctggcgccttaaaccaac 6078
Query: 61 ttggctaccgagagga 76
||||||||||||||||
Sbjct: 6079 ttggctaccgagagga 6094
>3x_Contig1503
Length = 10719
Score = 151 bits (76), Expect = 2e-36
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 1 gatctccagattacaaattgctttgtgttttcaaattacagtctggcgccttaaaccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3517 gatctccagattacaaattgctttgtgttttcaaattacagtctggcgccttaaaccaac 3576
Query: 61 ttggctaccgagagga 76
||||||||||||||||
Sbjct: 3577 ttggctaccgagagga 3592
>3x_Contig1722
Length = 17718
Score = 149 bits (75), Expect = 9e-36
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 gatctccagattacaaattgctttgtgttttcaaattacagtctggcgccttaaaccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5703 gatctccagattacaaattgctttgtgttttcaaattacagtctggcgccttaaaccaac 5762
Query: 61 ttggctaccgagagg 75
|||||||||||||||
Sbjct: 5763 ttggctaccgagagg 5777
>3x_Contig1263
Length = 6840
Score = 147 bits (74), Expect = 3e-35
Identities = 74/74 (100%)
Strand = Plus / Minus
Query: 1 gatctccagattacaaattgctttgtgttttcaaattacagtctggcgccttaaaccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5551 gatctccagattacaaattgctttgtgttttcaaattacagtctggcgccttaaaccaac 5492
Query: 61 ttggctaccgagag 74
||||||||||||||
Sbjct: 5491 ttggctaccgagag 5478
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5910
Number of Sequences: 1807
Number of extensions: 5910
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 5
length of query: 866
length of database: 10,358,551
effective HSP length: 16
effective length of query: 850
effective length of database: 10,329,639
effective search space: 8780193150
effective search space used: 8780193150
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)